Browsing by Author "Xie, Fuliang"
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A cotton miRNA is involved in regulation of plant response to salt stress
Gao, Shuai; Yang, Lu; Zeng, Hou Qing; Zhou, Zhao Sheng; Yang, Zhi Min; Li, Hua; Sun, Di; Xie, Fuliang; Zhang, Baohong (2016-01)The present study functionally identified a new microRNA (microRNA ovual line 5, miRNVL5) with its target gene GhCHR from cotton (Gossypium hirsutum). The sequence of miRNVL5 precursor is 104 nt long, with a well developed ... -
Deep sequencing reveals important roles of microRNAs in response to drought and salinity stress in cotton
Xie, Fuliang; Wang, Qinglian; Sun, Runrun; Zhang, Baohong (2015-02)Drought and salinity are two major environmental factors adversely affecting plant growth and productivity. However, the regulatory mechanism is unknown. In this study, the potential roles of small regulatory microRNAs ... -
Deep sequencing reveals important roles of microRNAs in response to drought and salinity stress in cotton
Xie, Fuliang; Wang, Qinglian; Sun, Runrun; Zhang, Baohong (2015-02)Drought and salinity are two major environmental factors adversely affecting plant growth and productivity. However, the regulatory mechanism is unknown. In this study, the potential roles of small regulatory microRNAs ... -
Deep Sequencing Reveals Transcriptome Re-Programming of Cells to the Elicitation with Methyl Jasmonate
Sun, Guiling; Yang, Yanfang; Xie, Fuliang; Wen, Jian-Fan; Wu, Jianqiang; Wilson, Iain W.; Tang, Qi; Liu, Hongwei; Qiu, Deyou (2013)Background Plant cell culture represents an alternative source for producing high-value secondary metabolites including paclitaxel (Taxol®), which is mainly produced in Taxus and has been widely used in cancer chemotherapy. ... -
Deep Sequencing Reveals Transcriptome Re-Programming of Taxus × media Cells to the Elicitation with Methyl Jasmonate
Sun, Guiling; Yang, Yanfang; Xie, Fuliang; Wen, Jian-Fan; Wu, Jianqiang; Wilson, Iain W.; Tang, Qi; Liu, Hongwei; Qiu, Deyou (2013-04-30)Background Plant cell culture represents an alternative source for producing high-value secondary metabolites including paclitaxel (Taxol®), which is mainly produced in Taxus and has been widely used in cancer chemotherapy. ... -
Development of Computational Tools and Resources for Cotton microRNA Analysis
Xie, Fuliang (East Carolina University, 2014)MicroRNAs (miRNAs) are an extensive class of small regulatory RNAs which regulate gene expression at the posttranscriptional levels. miRNAs target genes for mRNA cleavage or translation inhibition based on the complementary ... -
Genome sequencing and analysis of the paclitaxel-producing endophytic fungus NRRL 62431
Yang, Yanfang; Zhao, Hainan; Barrero, Roberto A; Zhang, Baohong; Sun, Guiling; Wilson, Iain W.; Xie, Fuliang; Walker, Kevin D; Parks, Joshua W; Bruce, Robert; Guo, Guangwu; Chen, Li; Zhang, Yong; Huang, Xin; Tang, Qi; Liu, Hongwei; Bellgard, Matthew I; Qiu, Deyou; Lai, Jinsheng; Hoffman, Angela (2014)Background Paclitaxel (Taxol™) is an important anticancer drug with a unique mode of action. The biosynthesis of paclitaxel had been considered restricted to the Taxus species until it was discovered in Taxomyces andreanae, ... -
Genome-Wide Functional Analysis of the Cotton Transcriptome by Creating an Integrated EST Database
Xie, Fuliang; Sun, Guiling; Stiller, John W.; Zhang, Baohong (2011)A total of 28,432 unique contigs (25,371 in consensus contigs and 3,061 as singletons) were assembled from all 268,786 cotton ESTs currently available. Several in silico approaches [comparative genomics, Blast, Gene Ontology ... -
Genome-wide functional analysis of the cotton transcriptome by creating an integrated EST database
Xie, Fuliang; Sun, Guiling; Stiller, John W.; Zhang, Baohong (2011-11-08)A total of 28,432 unique contigs (25,371 in consensus contigs and 3,061 as singletons) were assembled from all 268,786 cotton ESTs currently available. Several in silico approaches [comparative genomics, Blast, Gene Ontology ... -
Genome-Wide Identification of R2R3-MYB Genes and Expression Analyses During Abiotic Stress in
He, Qiuling; Jones, Don C.; Li, Wei; Xie, Fuliang; Ma, Jun; Sun, Runrun; Wang, Qinglian; Zhu, Shuijin; Zhang, Baohong (2016-03)The R2R3-MYB is one of the largest families of transcription factors, which have been implicated in multiple biological processes. There is great diversity in the number of R2R3-MYB genes in different plants. However, there ... -
Identification, characterization, and gene expression analysis of nucleotide binding site (NB)-type resistance gene homologues in switchgrass
Frazier, Taylor Price; Palmer, Nathan A.; Xie, Fuliang; Tobias, Christian M.; Donze-Reiner, Teresa J.; Bombarely, Aureliano; Childs, Kevin L.; Shu, Shengqiang; Jenkins, Jerry W.; Schmutz, Jeremy; Zhang, Baohong; Sarath, Gautam; Zhao, Bingyu (2016-11-08)Abstract Background Switchgrass (Panicum virgatum L.) is a warm-season perennial grass that can be used as a second generation bioenergy crop. However, foliar fungal ...