Autism BrainNet A Collaboration Between Medical Examiners, Pathologists, Researchers, and Families to Advance the Understanding and Treatment of Autism Spectrum Disorder Matthew P. Anderson, MD, PhD; Reade Quinton, MD; Karen Kelly, MD; Andrew Falzon, MD; Alycia Halladay, PhD; Cynthia M. Schumann, PhD; Patrick R. Hof, MD; Carol A. Tamminga, MD; Carolyn Komich Hare, MS; David G. Amaral, PhD  Context.—Autism spectrum disorder is a neurodevelop- are located in Oxford, England and Montreal, Quebec, mental condition that affects over 1% of the population Canada. worldwide. Developing effective preventions and treat- Data Sources.—Pubmed, Autism BrainNet. ments for autism will depend on understanding the Conclusions.—Because the death of autistic individuals neuropathology of the disorder. While evidence from is often because of an accident, drowning, suicide, or magnetic resonance imaging indicates altered develop- sudden unexpected death in epilepsy, they often are seen ment of the autistic brain, it lacks the resolution needed to in a medical examiner’s or coroner’s office. Yet, autism is identify the cellular and molecular underpinnings of the rarely considered when evaluating the cause of death. disorder. Postmortem studies of human brain tissue Advances in our understanding of chronic traumatic currently represent the only viable option to pursuing encephalopathy have occurred because medical examiners these critical studies. Historically, the availability of autism and neuropathologists questioned whether a pathologic brain tissue has been extremely limited. change might exist in individuals who played contact Objective.—To overcome this limitation, Autism Brain- sports and later developed severe behavioral problems. Net, funded by the Simons Foundation, was formed as a This article highlights the potential for equally significant network of brain collection sites that work in a coordinat- breakthroughs in autism arising from the proactive efforts ed fashion to develop a library of human postmortem brain of medical examiners, pathologists, and coroners in tissues for distribution to researchers worldwide. Autism partnership with Autism BrainNet. BrainNet has collection sites (or Nodes) in California, (Arch Pathol Lab Med. 2021;145:494–501; doi: 10.5858/ Texas, and Massachusetts; affiliated, international Nodes arpa.2020-0164-RA) Autism Spectrum Disorder (ASD) affects 1 of 59 people inthe United States, and likely worldwide, with 4 times Accepted for publication June 18, 2020. as many males diagnosed compared with females.1 Accord- Published online September 22, 2020. ing to the Diagnostic and Statistical Manual, the core From the Departments of Neurology and Pathology, Beth Israel diagnostic symptoms of autism are as follows: (1) persis- Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts (Anderson); Department of Laboratory Medicine and tently impaired social communication and interaction, and Pathology, Mayo Clinic, Rochester, Minnesota (Quinton); Depart- (2) restricted, repetitive patterns of behavior, interests, or ment of Pathology and Laboratory Medicine, Brody School of activities. Medicine at East Carolina University Greenville, North Carolina These symptoms arise early in development and may (Kelly); Office of the Chief State Medical Examiner, Trenton, New manifest as problems with social conversation, understand- Jersey (Falzon); Autism Science Foundation, New York, New York (Halladay); Department of Pharmacology and Toxicology, Rutgers ing nuances of language, or engaging with peers in social University, Piscataway, New Jersey (Halladay); The MIND Institute, activities. Challenges in nonverbal communication are also University of California at Davis, Sacramento (Schumann and seen including problems in the use or interpretation of body Amaral); Nash Family Department of Neuroscience, Friedman Brain language (gesturing) and facial expressions. Restricted and Institute, and Seaver Autism Center for Research and Treatment, repetitive patterns of behavior can include self-stimulatory Icahn School of Medicine at Mount Sinai, New York, New York (Hof); Department of Psychiatry, University of Texas Southwestern (stimming) behaviors, fixated interest on objects (eg, toys, Medical Center, Dallas (Tamminga); and Autism BrainNet, New cars), insistence on sameness, difficulty with changing York, New York (Hare). routine, and hypersensitivity or hyposensitivity to light or The authors have no relevant financial interest in the products or sound.2 companies described in this article. Typically, the diagnosis can be made by 24 months of age, Corresponding author: Matthew P. Anderson, MD, PhD, Depart- 3,4 ment of Pathology, Beth Israel Deaconess Medical Center, 330 but sometimes not until 36 months or later, although Brookl ine Ave, E/CLS-645, Boston, MA 02215 (emai l : earlier detection and diagnosis is sought for early treatment Matthew_Anderson@bidmc.harvard.edu). intervention. There is a wide range of symptom severities. 494 Arch Pathol Lab Med—Vol 145, April 2021 Brain Banking for Autism—Anderson et al However, the autism diagnosis is also dependent on cases of ASD.28–32 There have also been reports of reduced significant clinical impairment, such that symptoms interfere neuronal size and local number, particularly of pyramidal with daily functions. Of note, individuals with autism often neurons, in several neocortical areas, including the fusiform have comorbid medical, neurologic, and psychiatric symp- face area, the anterior insula, Broca’s area, the posteroin- toms, including seizures sometimes resulting in sudden ferior occipital gyrus, and the anterior cingulate cortex, in unexpected death in epilepsy,5 gastrointestinal symptoms,6 cases of idiopathic autism.13,33–36 This has also been anxiety, depression sometimes resulting in suicide, and observed to some degree in cases of ASD associated with sleep problems.7 Individuals with autism may also demon- maternal 15q11-13 duplication, dup15q syndrome.33 Of strate varying deficits in language and cognitive ability, note, postmortem brains from dup15q syndrome (a ranging from profound disability to savant skills.8 Previous relatively frequent and strongly penetrant genetic cause of to the most recent version of the Diagnostic and Statistical ASD37–39) also share many of the changes in gene expression Manual, there were different subtypes of autism, including and DNA methylation found in idiopathic ASD.40,41 Asperger syndrome and Pervasive Developmental Disorder Regions of the brain associated with social and emotional Not Otherwise Specified. In 2013, these subtypes were cognition, such as the amygdala and prefrontal cortices, are collapsed into 1 diagnosis ‘‘Autism Spectrum Disorder’’ also implicated in the neuropathology of ASD. A number of (ASD).8 magnetic resonance imaging studies find these brain regions Because a diagnosis of ASD requires specialized clinical are, in general, larger in children with ASD and do not training, many pediatricians and pediatric and adult undergo the same growth trajectory that occurs in neuro- typical development.42–44neurologists and psychiatrists taking care of these individ- Although magnetic resonance uals for other conditions (eg, epilepsy or depression) will imaging studies provide a macroscopic view of when and often use more generic labels, such as developmental delay where the brain may be developing differently in people or neurodevelopmental disorder. It is therefore important to with ASD, postmortem brain tissue is required to under- be aware of alternative labels when considering whether a stand the underlying cellular and molecular mechanisms. death might have arisen in connection with a case of autism. For example, a recent study of 52 human postmortem brains There is a higher mortality rate in autism compared with found that the enlarged amygdala in children with ASD may those without this diagnosis (further details below), and the be because of an excess number of neurons. 12 In contrast, causes of death differ based on sex and the presence or adults with ASD have fewer neurons, spines, and oligo- absence of intellectual disability.9 Postmortem diagnosis of dendrocytes in the amygdala indicating potential degener- 12,45,46 autism through interview of a parent or other caregiver has ative processes. In addition, functional magnetic been validated10 and is now in common use by Autism resonance imaging studies have pointed to impairment in BrainNet. face recognition and decreased activity in the fusiform face area in patients with ASD, which correlates to findings of WHAT IS KNOWN ABOUT THE NEUROPATHOLOGY OF abnormal pyramidal neuron numbers and volumes, specif- ASD? ically in this cortical region. 36,47 In addition, empathy deficits in ASD patients have been correlated to dysfunction of the As realized now for other behavioral disorders, such as anteroinferior insular cortex, a region in which neuron type- chronic traumatic encephalopathy,11 the goal of eventually specific alterations are known to occur in ASD.35,48 achieving a comprehensive understanding of the neuropa- Approximately 10% to 15% of autism cases carry genetic thology and neurobiology of autism will require contribu- defects that are considered to play a major causal role in the tions of the frontline efforts of medical examiners and behavioral disorder. The rapidly increasing number of pathologists who see many of the autism postmortem cases. autism-associated genetic defects include the following: (1) The neuropathology of autism spectrum disorder is a rapidly large cytogenetic abnormalities, such as extranumerary evolving area of research.12–14 The first substantial papers isodicentric chromosome 15q (idic[15]); (2) minute deletions using postmortem brain tissue from individuals with ASD or duplications of regions of the genome called copy were published in the mid-1980s15; however, the paucity of number variations; and (3) single nucleotide mutations available brains has slowed progress.16 Much of our within the exome or coding sequences of specific genes.49 knowledge since has come from magnetic resonance Genetic analysis of the autism postmortem brain cases has imaging studies (reviewed in Ref. 17). Recent studies reveal already begun and is ongoing.50 Of note, no single genetic increased extra-axial cerebrospinal fluid volumes18,19 in defect accounts for more than 1% of the autism cases. The children at risk for autism. A subset (~15%) of individuals large number of genetic changes in ASD has suggested to with ASD have enlarged heads (macrocephaly) and brains some that the use of behavioral measurements to diagnose (megalencephaly),20,21 including ASD, because of some rare autism may capture a heterogenous group of neurodevel- genetic disorders that magnify PI3K-AKT-mTOR signaling opmental disorders. pathway, such as phosphatase and tensin homolog (PTEN) Despite this clear genetic heterogeneity, there is some heterozygosity22 and heterozygous mutations of the gene evidence of convergence of these genetic defects into regulatory chromodomain helicase DNA binding protein 8 specific molecular pathways. These pathways include those (CHD8).23 Studies have also reported defects in brain underlying gene regulation and chromatin modification (eg, development that implicate in utero insults to the fetal CHD8) and, more directly, the pathways that determine brain. Cortical dysplasia is found in cases of idiopathic how neuronal circuits of the brain function, including genes ASD24–26 and in tuberous sclerosis with TSC1 and TSC2 encoding synaptic proteins (eg, neurexin, glutamate recep- gene mutations where the dysplasia correlates with the tor delta subunit, or SHANK family members). severity of autistic traits.27 Decreased numbers of cerebellar Beyond these rarer genetic forms of autism, there is Purkinje neurons (with relative preservation of the inferior building evidence of a neuroimmune form of autism based olive but also basket cells) suggests an early but post- on the findings of ongoing neuroinflammation in a majority developmental mechanism found in a subset of idiopathic of autism postmortem brains.51 These discoveries were Arch Pathol Lab Med—Vol 145, April 2021 Brain Banking for Autism—Anderson et al 495 made possible using the limited human autism and in preparation for writing this article, we reviewed the matching control postmortem brain tissues collected, in database held by the Office of the State Medical Examiner in part, from medical examiners and pathology departments New Jersey and found that of 593 840 reported deaths across the country. This neuroinflammatory phenotype between 1989 and 2017, only 22 cases had ‘‘Autism’’ within the brain is reflected in increased levels of cytokine included in the cause of death. Of these 22 cases, the and chemokine proteins and reactive astroglial and microg- majority were white (16 cases) and male (21 cases), with an lial transcripts.51–54 Recent studies using advanced single- age range of 13 to 70 years (mean age of 34.5 years). cell sequencing techniques in postmortem autism brain Included in the cause of death of these individuals were specimens have revealed transcriptional changes that are conditions that are seen at a higher rate in people with a most dramatic in upper cortical layer excitatory neurons diagnosis of ASD, such as seizures and drowning. In other along with evidence of an activated microglial response.55 A cases, autism was simply added as a contributory cause significant number of the postmortem autism donors have without the condition actually leading to the person’s epilepsy and have died of sudden unexpected death in demise, as was the case of a 70-year old whose proximate epilepsy. Sudden unexpected death in epilepsy is a fatal cause of death was listed as ‘‘Stroke due to atherosclerosis’’ complication of epilepsy defined as the sudden and (unpublished observations). When completing the death unexpected, nontraumatic and nondrowning death of a certificate, the physician should consider any potentially person with epilepsy, without anatomic or toxicologic lethal conditions of increased risk in a case of autism (see causes of death detected upon completion of the postmor- below) in order to accurately complete the death certifica- tem examination. One potential explanation for the high tion for these cases. incidence of an inflammatory state in the autism brain is Medical examiners face the challenge of establishing a seizures, yet seizures do not correlate with the changes direct link between autism and the underlying cause of identified by single-cell sequencing55 or the T-cell infiltrates death. In general, physicians would not have an issue recently discovered in the ASD postmortem brain (see adding autism as a contributory factor to the cause of death below).56 when, for example, it is classified as ‘‘Sudden Unexpected The driver of this inflammatory state present in a majority Death in Epilepsy’’ given the strong correlation between the of autism brain remains undefined, but recent studies 2 conditions. Arguably, even the deficits of ASD (eg, poor suggest a subset of autism cases may be caused by social skills, insensitivity to pain) can lead to diagnostic autoimmune disease. Approximately 5% to 10% of cases delays and jeopardize optimal health care, exacerbating of autism have been associated with maternal antibodies potentially treatable conditions, such as pneumonia that directed at the fetal brain57,58 and a larger proportion of could end with a fatal outcome. It is the position of this autism cases may have self-directed antibodies57,59 impli- group that in light of the increased mortality rate in patients cating the humoral immune system (B cells). While with ASD, a careful case review should be conducted when performing neuropathologic examinations of the postmor- completing the death certificate in order to identify any tem brains from individuals with autism collected into association between the cause of death and autism. The Autism BrainNet, increased numbers of perivascular CD8- main causes of premature death in ASD includes the rich T-lymphocyte cuffs were observed in approximately following. 65% of autism cases relative to control cases (Figure 1, A–L). Epilepsy In addition, a unique pathology, astrocyte membranous debris, was found in the Virchow-Robin perivascular and Epilepsy co-exists with autism in 20% of children and is particularly frequent in those with intellectual disabilities. A subarachnoid cerebrospinal fluid spaces, which resemble strong correlation exists between deaths associated with the blebs generated when cytotoxic T-cells attack tumor 56 epilepsy and ASD. 65 Recent studies have demonstrated cells (Figure 2, A–O). Interestingly, the quantity of these þ multiple genomic variants that may account for the co-GFAP astrocyte blebs (Figure 2, D–I) correlated to the existence of these conditions.66 Increased awareness and number of lymphocytes across the autism cases (Figure 3). further research in this area may lead to the development of While still under investigation, these findings suggest the novel therapeutic interventions to reduce the high incidence possibility that a lymphocyte-based adaptive T-cell immune of premature death related to the seizures in ASD. Seizures response might drive the inflammatory state of the brain in account for 7% to 30% of deaths in individuals with ASD, autism. These exciting new findings represent possible new including sudden unexpected death in epilepsy, intractable therapeutic targets that are not yet a part of the standard seizures, and cardiac/respiratory arrest as a consequence of treatment for ASD and could positively impact the lives of seizures.62,67,68 many individuals and their families. Further studies of the human postmortem brain in ASD are essential to justify and Suicide motivate the expensive clinical trials that will need to be Depression is more commonly diagnosed in persons with performed to advance the standard of treatment in autism ASD who have preserved language fluency and average or based on these new and exciting findings. above intellectual functioning. Persons with this particular ASD profile often present with co-existing psychiatric WHAT IS KNOWN ABOUT THE CAUSES OF DEATH IN conditions.69 Importantly, individuals (children and adults; ASD? females . males) with autism have a much higher incidence A 2016 study in Sweden on the premature mortality in of suicidal ideation and attempts as compared with the ASD showed that individuals with this diagnosis have a 2.5- general population.9,70–72 fold higher risk of premature death as compared with the general population.9 Other studies have confirmed this Accidental Deaths/Wandering/Elopement increased standardized mortality ratio among individuals Accidental deaths including drowning and suffocation are with ASD in different population groups.60–64 Interestingly, more frequent in ASD as compared with the general 496 Arch Pathol Lab Med—Vol 145, April 2021 Brain Banking for Autism—Anderson et al Figure 1. Expanded lymphocytic cuffs were found in approximately 65% of autism spectrum disorder cases. Representative images of blood vessels in the brain parenchyma of 2 control patients (A–D) and 4 patients carrying an autism diagnosis (E–H) (including genetic conditions PTEN heterozygous mutations of phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase, PTEN [I and J], and an extra Y chromosome, XYY [K and L]) show increased abundance of perivascular lymphocytes in the autism cases. H&Eþ LFB, hematoxylin and eosin/ luxol fast blue (myelin) stain. All scale bars represent 40 lm. All available H&E þ LFB–stained slides were reviewed with a standard bright field microscope, and photographs were taken using a360 objective (3600 total magnification). Adapted from Distasio et al. Annals of Neurology, 2019 with permission by John Wiley & Sons, Inc. Figure 2. Astrocyte blebs form from the glia limitans at the cerebrospinal fluid–brain barrier in autism spectrum disorder. Left, Round and uniformly eosinophilic membranous blebs of varying sizes were identified in the perivascular Virchow-Robin spaces of autism brains (A–C). H&E þ LFB, hematoxylin and eosin/luxol fast blue (myelin) stain (A–C). Middle, glial fibrillary acidic protein (GFAP) immunohistochemistry with high magnification view of astrocyte foot processes (white arrows) extending to glia limitans where blebs are forming (D–I). Right, S100B, astrocyte marker immunohistochemistry (J–L). Right, Aldehyde Dehydrogenase 1 Family Member L1 (ALDH1L1), a cytosolic 10-formyltetrahydrofolate dehydrogenase, immunohistochemistry labeling astrocytes (M–O). All scale bars represent 40 lm. Photographed using a340 objective (3400 total magnification). Adapted from Distasio et al. Annals of Neurology, 2019 with permission by John Wiley & Sons, Inc. Arch Pathol Lab Med—Vol 145, April 2021 Brain Banking for Autism—Anderson et al 497 associated co-morbidities/risks to accurately capture this information. WHAT IS AUTISM BRAINNET AND WHY WAS IT ESTABLISHED? Researchers studying other clinical disorders such as Parkinson disease, Alzheimer disease, and schizophrenia have demonstrated substantial success in collecting brain donations with a confederated model of regional collection sites distributed across the country. The Stanley Brain Collection, focused on schizophrenia and bipolar disorder, was an inspiration for Autism BrainNet. When the Stanley Brain Collection began in 1994, there was a severe shortage of brain tissue available for research on these major psychiatric diseases. In a decade and a half, the Stanley Brain Collection has successfully collected more than 600 brains into their network, resulting in research publications employing a wide range of methodologies and examining a diverse array of brain regions.77 For Autism BrainNet, a plan was drafted in 2009 that proposed the implementation of a confederated network model for the optimal acquisition, preparation, and distri- bution of postmortem brains to support autism research. In Figure 3. The quantity of perivascular astrocyte debris correlates to perivascular lymphocytes in autism spectrum disorder. A plot of short, this model was composed of a series of university- perivascular GFAPþ debris against perivascular lymphocyte counts based collection sites around the country. A key element of (top 16 vessels) for each case shows the correlation between the model was that although brain tissue would be collected astrocyte-derived debris and lymphocyte numbers. **P , .001 for linear regionally at several sites, all acquired tissue would regression; the rank-order correlation has a Kendall’s tau of 0.51 (P ¼ contribute to a general pool for use by the autism research .01). Adapted from Distasio et al. Annals of Neurology, 2019 with permission by John Wiley & Sons, Inc. community. The rationale for having several regional collection sites was 2-fold. First, it was thought that families would be more inclined to make a donation to an institution population.61,73 Poor social communication is thought to that had local name recognition; second, collecting cases predispose ASD individuals to an increased risk of locally could reduce the interval from death to brain accidental death. Roughly half of children with ASD attempt processing. to elope from their safe environment at a rate nearly 4 times To insure standardized regulatory management across all higher than their unaffected siblings.74–76 Accidental drown- Nodes, Autism BrainNet engaged the services of Western ing accounts for 70% to 90% of total US deaths reported in institutional review board to provide in-depth expertise and children with ASD ages 14 and younger subsequent to capacity for multisite coordination. Before launching these wandering/elopement.73,74 More than one-third of ASD operations, the Western institutional review board conduct- children who wander/elope are never or rarely able to ed an initial review of Autism BrainNet’s standard operating communicate their name, address, or phone number. Two- procedures, including clinical processes (consenting and thirds of parents of elopers reported that their missing postmortem characterization of donated brain tissue). Upon children had a ‘‘close call’’ with a traffic injury or satisfying the Western institutional review board’s require- drowning.74 ments, effective June 19th, 2014, the Western institutional Other review board provided a certificate of approval for Autism BrainNet’s national consent for postmortem tissue dona- Excluding seizures, suicides, and accidents, the cause of tion, and consent for donor family clinical documentation, death in the remaining ASD group mirrors the heteroge- clinical questionnaires, and protocol. Once the Node sites nous medical conditions seen in the general population, were selected and institutional review board oversight was including cardiac and cancer-related deaths. established, Autism BrainNet was formally launched at the Given the wide symptomatic variation of ASD, the International Meeting for Autism Research in May of 2014. presence of co-morbidities, and the possible side effects of The overall structure of Autism BrainNet is illustrated in medications, determining the exact cause of death in ASD Figure 4. can be a challenge for the physician completing the death Each of the nodes is staffed with personnel who are highly certificate. In the forensic setting, medical examiners and trained in the preparation and storage of donated brains. coroners may not be aware of the diagnosis of ASD. Scene Using standard operating procedures that are consistent investigators should question the family about the possibil- across all nodes, these staff prepare 1 hemisphere as ity of autism in cases with death related to the mechanisms unfixed, fresh-frozen coronal slabs while the contralateral listed above. The authors suspect that many cases of ASD hemisphere is fixed and is used for neuroanatomic studies have been missed in the past because of the lack of and a clinical neuropathology report when required. The awareness of these presenting features. Because death fixed half is alternated or directed to the side with clinical, certificates are the principal source of statistical data, it radiologic, or gross evidence of brain disease. A number of would be beneficial if physicians (including medical meetings took place, with the assistance of several examiners) familiarized themselves with autism and any knowledgeable consultants, to establish the standard 498 Arch Pathol Lab Med—Vol 145, April 2021 Brain Banking for Autism—Anderson et al Figure 4. Overall organizational structure of Autism BrainNet (ABN). operating procedures for preparation of the brain tissue. brain will be sent. Any medical examiner, pathologist, This is an evolving process, with the goal of establishing diener, or scene investigator can support Autism BrainNet procedures that will allow distribution of samples from each by emailing or faxing a daily list of cases for review brain to as many researchers as possible. By collating the (following Health Insurance Portability and Accountability experimental results (eg, genetics, neuropathology, immu- Act regulations), or by calling the hotline regarding a nology, neurobiology) from each case and individual specific donation. It is very important to watch for both samples into a central data repository, it is anticipated that autism (any age) and control cases (,50 years of age); the the ASD cases can be subclassified into more uniform sets, collection of autism cases is growing while the number of possibly with shared etiologic mechanisms, enriching the control cases is beginning to fall behind. The National value of each donation over time. Association of Medical Examiners supports the efforts of individual medical examiners by providing Autism Brain- Successful Collaborations with Medical Examiners Offices Net’s contact information on its website. and Pathology Autopsy Services The benefits of partnering with Autism BrainNet include Over the past several years, Autism BrainNet has the following: (1) reimbursement for time, materials, and developed successful partnerships with medical examiner other costs associated with brain recovery; (2) a free gross offices around the country. Each of these partnerships is examination or full clinical neuropathology report by an uniquely configured based upon the demands, state statutes, expert clinical neuropathologist at Harvard Medical School, culture, and interests of the physicians and staff at each including gross and microscopic examinations and clinical medical examiner’s office. For example, in 1 medical diagnoses with references, includes standard hematoxylin examiner’s office, Autism BrainNet provides an embedded and eosin and luxol fast blue myelin stain (demyelinating diener who conducts brain removal after identifying and diseases), as well as other special and immunohistochemical consenting potential donors. Another medical examiner’s stains for infectious organisms (bacteria, fungus, spiro- office designates an Autism BrainNet supported staff person chetes, and specific central nervous system viruses), T- to review daily field investigation reports to identify lymphocytes and B-lymphocytes (autoimmune or viral potential donors; this individual then conducts the consent encephalitis), reactive astrogliosis and microgliosis, neo- when appropriate. A third example involves a medical plasms, b-amyloid and tau proteins (typical of chronic examiner who alerts Autism BrainNet about potential traumatic encephalopathy, chronic traumatic encephalopa- donors by calling the 24/7 donor hotline. In this example, thy ,and other neurodegenerative diseases), and neuronal Autism BrainNet clinical staff do the consenting and the abnormalities (cortical dysplasia or heterotopias, ischemic/ medical examiner procures the brain and uses packaging hypoxic injuries or strokes, changes typical of mesial sent to the medical examiner’s office and courier services temporal lobe epilepsy). Molecular diagnostic tests are not arranged by the nearest Node tissue coordinator where the routinely performed during the neuropathology workup for Arch Pathol Lab Med—Vol 145, April 2021 Brain Banking for Autism—Anderson et al 499 these cases; (3) recovery protocols, shipping materials and 20. Amaral DG, Li D, Libero L, et al. In pursuit of neurophenotypes: the courier services all coordinated by Autism BrainNet; and (4) consequences of having autism and a big brain. Autism Res. 2017;10(5):711– 722. next of kin is provided with access to the Donor Aftercare 21. Fombonne E, Roge? B, Claverie J, Courty S, Fremolle J. Microcephaly and Program provided by Autism BrainNet. Materials for macrocephaly in autism. J Autism Dev Disord. 1999;29(2):113–119. shipping brain donations as well as protocols for tissue 22. Yeung KS, Tso WWY, Ip JJK, et al. Identification of mutations in the PI3K- AKT-mTOR signalling pathway in patients with macrocephaly and developmental preparation are available on request. Shipping materials delay and/or autism. Mol Autism. 2017;8:66. have been sent to several medical examiner’s offices in 23. Bernier R, Golzio C, Xiong B, et al. Disruptive CHD8 mutations define a anticipation of future donations. subtype of autism early in development. Cell. 2014;158(2):263–276. 24. Avino TA, Hutsler JJ. Abnormal cell patterning at the cortical gray-white Developing a Strategy for Increasing Collaboration of matter boundary in autism spectrum disorders. Brain Res. 2010;1360:138–146. 25. Casanova MF, El-Baz AS, Kamat SS, et al. Focal cortical dysplasias in autism Autism BrainNet with Medical Examiners Offices and spectrum disorders. Acta Neuropathol Commun. 2013;1:67. Pathology Autopsy Services 26. Wegiel J, Kuchna I, Nowicki K, et al. The neuropathology of autism: defects of neurogenesis and neuronal migration, and dysplastic changes. Acta Neuro- While Autism BrainNet has developed successful rela- pathol. 2010;119(6):755–770. tionships with a few medical examiners and pathology 27. Mous SE, Overwater IE, Vidal Gato R, et al. Cortical dysplasia and autistic departments across the country, there remains a shortage of trait severity in children with Tuberous Sclerosis Complex: a clinical epidemi- ological study. Eur Child Adolesc Psychiatry. 2018;27(6):753–765. brain tissue available for research in autism. Increasing the 28. Bailey, Luthert P, Dean A, et al. A clinicopathological study of autism. Brain. number of partnerships with medical examiners, coroners, 1998;121(5):889–905. and pathology departments is key in developing this 29. Kemper TL, Bauman ML. The contribution of neuropathologic studies to the precious resource for autism and related neurodevelopmen- understanding of autism. Neurol Clin. 1993;11(1):175–187.30. Kemper TL, Bauman ML. Neuropathology of infantile autism. Mol tal research. Autism BrainNet aims to better understand Psychiatry. 2002;7 Suppl 2:S12–3. ways to promote these collaborations and to overcome the 31. Whitney ER, Kemper TL, Bauman ML, Rosene DL, Blatt GJ. Cerebellar limitations and obstacles medical examiners may face in Purkinje cells are reduced in a subpopulation of autistic brains: a stereological experiment using calbindin-D28k. Cerebellum. 2008;7(3):406–416. providing tissues for research. 32. Whitney ER, Kemper TL, Rosene DL, Bauman ML, Blatt GJ. Density of References cerebellar basket and stellate cells in autism: evidence for a late developmental loss of Purkinje cells. J Neurosci Res. 2009;87(10):2245–2254. 1. Christensen DL, Braun KVN, Baio J, et al. Prevalence and characteristics of 33. Simms ML, Kemper TL, Timbie CM, Bauman ML, Blatt GJ. The anterior autism spectrum disorder among children aged 8 years - autism and cingulate cortex in autism: heterogeneity of qualitative and quantitative developmental disabilities monitoring network, 11 sites, United States, 2012. cytoarchitectonic features suggests possible subgroups. Acta Neuropathol. MMWR Surveill Summ. 2018;65(13):1–23. 2009;118(5):673–684. 2. Association AP. Diagnostic and Statistical Manual of Mental Disorders: 34. Wegiel J, Flory M, Kuchna I, et al. Neuronal nucleus and cytoplasm volume DSM-5. 5th edition. Washington, DC: American Psychiatric Association; 2013. deficit in children with autism and volume increase in adolescents and adults. 3. Ozonoff S, Gangi D, Hanzel EP, et al. Onset patterns in autism: variation Acta Neuropathol Commun. 2015;3:2. across informants, methods, and timing. Autism Res. 2018;11(5):788–797. 35. Santos M, Uppal N, Butti C, et al. Von Economo neurons in autism: a 4. Ozonoff S, Young GS, Brian J, et al. Diagnosis of autism spectrum disorder stereologic study of the frontoinsular cortex in children. Brain Res. 2011;1380: after age 5 in children evaluated longitudinally since infancy. J Am Acad Child 206–217. Adolesc Psychiatry. 2018;57(11):849–857 e2. 36. van Kooten IA, Palmen SJ, von Cappeln P, et al. Neurons in the fusiform 5. Tuchman R. What is the relationship between autism spectrum disorders gyrus are fewer and smaller in autism. Brain. 2008;131(4):987–999. and epilepsy? Semin Pediatr Neurol. 2017;24(4):292–300. 37. Finucane BM, Lusk L, Arkilo D, et al. 15q Duplication syndrome and 6. Holingue C, Newill C, Lee LC, Pasricha PJ, Daniele Fallin M. related disorders. In: Adam MP, Ardinger HH, Pagon RA, et al., eds. Gastrointestinal symptoms in autism spectrum disorder: a review of the literature GeneReviews((R)). Seattle, WA; University of Washington, Seattle; 1993. on ascertainment and prevalence. Autism Res. 2018;11(1):24–36. 38. Krishnan V, Stoppel DC, Nong Y, et al. Autism gene Ube3a and seizures 7. Diaz-Roman A, Zhang J, Delorme R, Beggiato A, Cortese S. Sleep in youth impair sociability by repressing VTA Cbln1. Nature. 2017;543(7646):507–512. with autism spectrum disorders: systematic review and meta-analysis of subjective and objective studies. Evid Based Ment Health. 2018;21(4):146–154. 39. Smith SE, Zhou YD, Zhang G, Jin Z, Stoppel DC, Anderson MP. Increased 8. Lord C, Elsabbagh M, Baird G, Veenstra-Vanderweele J. Autism spectrum gene dosage of Ube3a results in autism traits and decreased glutamate synaptic disorder. Lancet. 2018;392(10146):508–520. transmission in mice. Sci Transl Med. 2011;3(103):103ra97. 9. Hirvikoski T, Mittendorfer-Rutz E, Boman M, Larsson H, Lichtenstein P, 40. Parikshak NN, Swarup V, Belgard TG, et al. Genome-wide changes in Bolte S. Premature mortality in autism spectrum disorder. Br J Psychiatry. 2016; lncRNA, splicing, and regional gene expression patterns in autism. Nature. 2016; 208(3):232–238. 540(7633):423–427. 10. Falkmer T, Anderson K, Falkmer M, Horlin C. Diagnostic procedures in 41. Wong CCY, Smith RG, Hannon E, et al. Genome-wide DNA methylation autism spectrum disorders: a systematic literature review. Eur Child Adolesc profiling identifies convergent molecular signatures associated with idiopathic Psychiatry. 2013;22(6):329–340. and syndromic autism in post-mortem human brain tissue. Human Mol Genet. 11. McKee AC, Cantu RC, Nowinski CJ, et al. Chronic traumatic encephalop- 2019;28(13):2201–2211. athy in athletes: progressive tauopathy after repetitive head injury. J Neuropathol 42. Nordahl CW, Iosif AM, Young GS, et al. High psychopathology subgroup in Exp Neurol. 2009;68(7):709–735. young children with autism: associations with biological sex and amygdala 12. Avino TA, Barger N, Vargas MV, et al. Neuron numbers increase in the volume [published online January 20, 2020]. J Am Acad Child Adolesc human amygdala from birth to adulthood, but not in autism. Proc Natl Acad Sci U Psychiatry. doi: 10.1016/j.jaac.2019.11.022 S A. 2018;115(14):3710–3715. 43. Schumann CM, Bloss CS, Barnes CC, et al. Longitudinal magnetic 13. Varghese M, Keshav N, Jacot-Descombes S, et al. Autism spectrum resonance imaging study of cortical development through early childhood in disorder: neuropathology and animal models. Acta Neuropathol. 2017;134(4): autism. J Neurosci. 2010;30(12):4419–4427. 537–566. 44. Schumann CM, Barnes CC, Lord C, Courchesne E. Amygdala enlargement 14. Anderson MP. Autism spectrum disorders. In: Adle-Biassette BH, Golden J, in toddlers with autism related to severity of social and communication eds. Developmental Neuropathology. Hoboken, NJ: Wiley-Blackwell; 2018:477– impairments. Biol Psychiatry. 2009;66(10):942–949. 495. 45. Morgan JT, Barger N, Amaral DG, Schumann CM. Stereological study of 15. Bauman M, Kemper TL. Histoanatomic observations of the brain in early amygdala glial populations in adolescents and adults with autism spectrum infantile autism. Neurology. 1985;35(6):866–874. disorder. PLoS One. 2014;9(10):e110356. 16. Amaral DG, Anderson MP, Ansorge O, et al. Autism BrainNet: s network of 46. Weir RK, Bauman MD, Jacobs B, Schumann CM. Protracted dendritic postmortem brain banks established to facilitate autism research. Handb Clin growth in the typically developing human amygdala and increased spine density Neurol. 2018;150:31–39. in young ASD brains. J Comp Neurol. 2018;526(2):262–274. 17. Amaral DG, Schumann CM, Nordahl CW. Neuroanatomy of autism. Trends 47. Pierce K, Haist F, Sedaghat F, Courchesne E. The brain response to Neurosci. 2008;31(3):137–145. personally familiar faces in autism: findings of fusiform activity and beyond. 18. Shen MD, Kim SH, McKinstry RC, et al. Increased extra-axial cerebrospinal Brain. 2004;127(Pt 12):2703–2716. fluid in high-risk infants who later develop autism. Biol Psychiatry. 2017;82(3): 48. Gu X, Hof PR, Friston KJ, Fan J. Anterior insular cortex and emotional 186–193. awareness. J Comp Neurol. 2013;521(15):3371–3388. 19. Shen MD, Nordahl CW, Young GS et al. Early brain enlargement and 49. de la Torre-Ubieta L, Won H, Stein JL, Geschwind DH. Advancing the elevated extra-axial fluid in infants who develop autism spectrum disorder. Brain. understanding of autism disease mechanisms through genetics. Nat Med. 2016; 2013;136(Pt 9):2825–2835. 22(4):345–361. 500 Arch Pathol Lab Med—Vol 145, April 2021 Brain Banking for Autism—Anderson et al 50. D’Gama AM, Pochareddy S, Li M, et al. Targeted DNA Sequencing from 64. Smith DaWalt L, Hong J, Greenberg JS, Mailick MR. Mortality in individuals autism spectrum disorder brains implicates multiple genetic mechanisms. with autism spectrum disorder: predictors over a 20-year period. Autism. 2019; Neuron. 2015;88(5):910–917. 23(7):1732–1739. 51. Vargas DL, Nascimbene C, Krishnan C, Zimmerman AW, Pardo CA. 65. Mouridsen SE, Bronnum-Hansen H, Rich B, Isager T. Mortality and causes Neuroglial activation and neuroinflammation in the brain of patients with autism. of death in autism spectrum disorders: an update. Autism. 2008;12(4):403–414. Ann Neurol. 2005;57(1):67–81. 66. McTague A, Howell KB, Cross JH, Kurian MA, Scheffer IE. The genetic 52. Gupta S, Ellis SE, Ashar FN, et al. Transcriptome analysis reveals landscape of the epileptic encephalopathies of infancy and childhood. Lancet dysregulation of innate immune response genes and neuronal activity-dependent Neurol. 2016;15(3):304–316. genes in autism. Nat Commun. 2014;5:5748. 67. Pickett J, Xiu E, Tuchman R, Dawson G, Lajonchere C. Mortality in 53. Morgan JT, Chana G, Abramson I, Semendeferi K, Courchesne E, Everall IP. individuals with autism, with and without epilepsy. J Child Neurol. 2011;26(8): Abnormal microglial–neuronal spatial organization in the dorsolateral prefrontal 932–939. cortex in autism. Brain Res. 2012;1456:72–81. 68. Woolfenden S, Sarkozy V, Ridley G, Coory M, Williams K. A systematic 54. Voineagu I, Wang X, Johnston P, et al. Transcriptomic analysis of autistic review of two outcomes in autism spectrum disorder - epilepsy and mortality. Dev brain reveals convergent molecular pathology. Nature. 2011;474(7351):380– Med Child Neurol. 2012;54(4):306–312. 384. 69. Croen LA, Zerbo O, Qian Y, et al. The health status of adults on the autism 55. Velmeshev D, Schirmer L, Jung D, et al. Single-cell genomics identifies cell spectrum. Autism. 2015;19(7):814–823. type-specific molecular changes in autism. Science. 2019;364(6441):685–689. 70. Cassidy S, Bradley P, Robinson J, Allison C, McHugh M, Baron-Cohen S. Suicidal ideation and suicide plans or attempts in adults with Asperger’s 56. DiStasio MM, Nagakura I, Nadler MJ, Anderson MP. T lymphocytes and syndrome attending a specialist diagnostic clinic: a clinical cohort study. Lancet cytotoxic astrocyte blebs correlate across autism brains. Ann Neurol. 2019;86(6): Psychiatry. 2014;1(2):142–147. 885–898. 71. Richards G, Kenny R, Griffiths S, et al. Autistic traits in adults who have 57. Edmiston E, Ashwood P, Van de Water J. Autoimmunity, autoantibodies, attempted suicide. Mol Autism. 2019;10:26. and autism spectrum disorder. Biol Psychiatry. 2017;81(5):383–390. 72. South M, Beck JS, Lundwall R, et al. Unrelenting depression and suicidality 58. Jones KL, Van de Water J. Maternal autoantibody related autism: in women with autistic traits [published online December 9, 2019]. J Autism Dev mechanisms and pathways. Mol Psychiatry. 2019;24(2):252–265. Disord. doi: 10.1007/s10803-019-04324-2 59. Quadros EV, Sequeira JM, Brown WT, et al. Folate receptor autoantibodies 73. Guan J, Li G. Characteristics of unintentional drowning deaths in children are prevalent in children diagnosed with autism spectrum disorder, their normal with autism spectrum disorder. Inj Epidemiol. 2017;4(1):32. siblings and parents. Autism Res. 2018;11(5):707–712. 74. Anderson C, Law JK, Daniels A, et al. Occurrence and family impact of 60. Akobirshoev I, Mitra M, Dembo R, Lauer E. In-hospital mortality among elopement in children with autism spectrum disorders. Pediatrics. 2012;130(5): adults with autism spectrum disorder in the United States: a retrospective analysis 870–877. of US hospital discharge data. Autism. 2020;24(1):177–189. 75. Kiely B, Migdal TR, Vettam S, Adesman A. Prevalence and correlates of 61. Guan J, Li G. Injury mortality in individuals with autism. Am J Public elopement in a nationally representative sample of children with developmental Health. 2017;107(5):791–793. disabilities in the United States. PLoS One. 2016;11(2):e0148337. 62. Hwang YIJ, Srasuebkul P, Foley KR, Arnold S, Trollor JN. Mortality and 76. Rice CE, Zablotsky B, Avila RM, et al. Reported wandering behavior among cause of death of Australians on the autism spectrum. Autism Res. 2019;12(5): children with autism spectrum disorder and/or intellectual disability. J Pediatr. 806–815. 2016;174:232–239 e2. 63. Schendel DE, Overgaard M, Christensen J, et al. Association of psychiatric 77. Torrey EF, Webster M, Knable M, Johnston N, Yolken RH. The stanley and neurologic comorbidity with mortality among persons with autism spectrum foundation brain collection and neuropathology consortium. Schizophr Res. disorder in a danish population. JAMA Pediatr. 2016;170(3):243–250. 2000;44(2):151–155. Arch Pathol Lab Med—Vol 145, April 2021 Brain Banking for Autism—Anderson et al 501