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    Comprehensive analysis of TCP transcription factors and their expression during cotton () fiber early development

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    Author
    Ma, Jun; Liu, Fang; Wang, Qinglian; Wang, Kunbo; Jones, Don C.; Zhang, Baohong
    Abstract
    TCP proteins are plant-specific transcription factors implicated to perform a variety of physiological functions during plant growth and development. In the current study, we performed for the first time the comprehensive analysis of TCP gene family in a diploid cotton species, Gossypium arboreum, including phylogenetic analysis, chromosome location, gene duplication status, gene structure and conserved motif analysis, as well as expression profiles in fiber at different developmental stages. Our results showed that G. arboreum contains 36 TCP genes, distributing across all of the thirteen chromosomes. GaTCPs within the same subclade of the phylogenetic tree shared similar exon/intron organization and motif composition. In addition, both segmental duplication and whole-genome duplication contributed significantly to the expansion of GaTCPs. Many these TCP transcription factor genes are specifically expressed in cotton fiber during different developmental stages, including cotton fiber initiation and early development. This suggests that TCP genes may play important roles in cotton fiber development.
    URI
    http://hdl.handle.net/10342/5487
    Subject
     Plant sciences; Genetics 
    Date
    2016-02
    Citation:
    APA:
    Ma, Jun, & Liu, Fang, & Wang, Qinglian, & Wang, Kunbo, & Jones, Don C., & Zhang, Baohong. (February 2016). Comprehensive analysis of TCP transcription factors and their expression during cotton () fiber early development. Scientific Reports, (1-10. Retrieved from http://hdl.handle.net/10342/5487

    Display/Hide MLA, Chicago and APA citation formats.

    MLA:
    Ma, Jun, and Liu, Fang, and Wang, Qinglian, and Wang, Kunbo, and Jones, Don C., and Zhang, Baohong. "Comprehensive analysis of TCP transcription factors and their expression during cotton () fiber early development". Scientific Reports. . (1-10.), February 2016. August 11, 2022. http://hdl.handle.net/10342/5487.
    Chicago:
    Ma, Jun and Liu, Fang and Wang, Qinglian and Wang, Kunbo and Jones, Don C. and Zhang, Baohong, "Comprehensive analysis of TCP transcription factors and their expression during cotton () fiber early development," Scientific Reports 6, no. (February 2016), http://hdl.handle.net/10342/5487 (accessed August 11, 2022).
    AMA:
    Ma, Jun, Liu, Fang, Wang, Qinglian, Wang, Kunbo, Jones, Don C., Zhang, Baohong. Comprehensive analysis of TCP transcription factors and their expression during cotton () fiber early development. Scientific Reports. February 2016; 6() 1-10. http://hdl.handle.net/10342/5487. Accessed August 11, 2022.
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